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'''Here are a few things to know about the software stack:''' | '''Here are a few things to know about the software stack:''' | ||
* Most [[Python]] modules are not installed as modules. They are instead provided as binary [http:// | * Most [[Python]] modules are not installed as modules. They are instead provided as binary [http://pythonwheels.com wheels]. One such package is [[Tensorflow]]. For instructions on how to install Python packages, see the [[Python]] page. | ||
* Similarly, most [[R]] or [[Perl]] packages are not installed either. We recommend installing them in your | * Similarly, most [[R]] or [[Perl]] packages are not installed either. We recommend installing them in your personal or group file space. See the [[R]] and [[Perl]] pages for instructions on how to do so. | ||
* Note that [https://www.docker.com/ Docker] is not available on Compute Canada clusters but [http://singularity.lbl.gov/ Singularity] is available in the directory <tt>/opt/software</tt>. Docker containers can be converted to Singularity as discussed [http://singularity.lbl.gov/docs-docker here]. | * Note that [https://www.docker.com/ Docker] is not available on Compute Canada clusters but [http://singularity.lbl.gov/ Singularity] is available in the directory <tt>/opt/software</tt>. Docker containers can be converted to Singularity as discussed [http://singularity.lbl.gov/docs-docker here]. | ||
* Some of the software packages listed below are not accessible to all users because they require you to have a license. You may need to be granted access to them by us. Loading the module for one of these will give you instructions on what to do to obtain access to it. | * Some of the software packages listed below are not accessible to all users because they require you to have a license. You may need to be granted access to them by us. Loading the module for one of these will give you instructions on what to do to obtain access to it. | ||