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Available software: Difference between revisions
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Here are a few things to know about the available software: | Here are a few things to know about the available software: | ||
* Most [[Python]] modules are not installed as (Lmod) modules. They are instead provided as binary [[Available_Python_wheels|wheels]], stored on | * Most [[Python]] modules are not installed as (Lmod) modules. They are instead provided as binary [[Available_Python_wheels|wheels]], stored on our systems under <code>/cvmfs/soft.computecanada.ca/custom/python/wheelhouse/</code>. One such package is [[TensorFlow]]. For instructions on how to install or list Python packages, see the [[Python]] page. | ||
* Similarly, most [[R]] or [[Perl]] packages are not installed either. We recommend installing them in your personal or group file space. See the [[R]] and [[Perl]] pages for instructions on how to do so. | * Similarly, most [[R]] or [[Perl]] packages are not installed either. We recommend installing them in your personal or group file space. See the [[R]] and [[Perl]] pages for instructions on how to do so. | ||
* A page discusses [[symbolic algebra software]] like Mathematica and Sage. | * A page discusses [[symbolic algebra software]] like Mathematica and Sage. | ||
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==List of globally-installed modules== <!--T:4--> | ==List of globally-installed modules== <!--T:4--> | ||
The table below lists software for which an environment module has been installed on our systems. In simple cases, the module name listed in the Module column can be used with the <code>module load</code> command to configure your environment. In more complicated cases, some prerequisite modules may also need to be loaded. Click on the corresponding [Expand] link in the Description column for a list of prerequisites and brief notes about the software. If more extensive documentation about a package is available, there will be a link in the Documentation column. Click the double arrows in the column heading to sort in ascending or descending order for a given column. In particular, sorting by software type might be of interest. The Type column shows the software tagged as: ai (artificial intelligence), bio (biology, bioinformatics), chem (chemistry), geo (earth sciences), io (input/output), math (mathematics), mpi ([[MPI]]), phys (physics and engineering), tools (languages and libraries), vis ([[visualization]]). | The table below lists software for which an environment module has been installed on our systems. In simple cases, the module name listed in the <i>Module</i> column can be used with the <code>module load</code> command to configure your environment. In more complicated cases, some prerequisite modules may also need to be loaded. Click on the corresponding <i>[Expand]</i> link in the <i>Description</i> column for a list of prerequisites and brief notes about the software. If more extensive documentation about a package is available, there will be a link in the <i>Documentation</i> column. Click the double arrows in the column heading to sort in ascending or descending order for a given column. In particular, sorting by software type might be of interest. The Type column shows the software tagged as: ai (artificial intelligence), bio (biology, bioinformatics), chem (chemistry), geo (earth sciences), io (input/output), math (mathematics), mpi ([[MPI]]), phys (physics and engineering), tools (languages and libraries), vis ([[visualization]]). | ||
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